diff --git a/LICENSE-MIT b/LICENSE-MIT
index 6123def..0672773 100644
--- a/LICENSE-MIT
+++ b/LICENSE-MIT
@@ -1,4 +1,4 @@
-Copyright (c) Rafael Xavier de Souza http://rafael.xavier.blog.br
+Copyright OpenJS Foundation and other contributors, https://openjsf.org/
 
 Permission is hereby granted, free of charge, to any person
 obtaining a copy of this software and associated documentation
diff --git a/README.md b/README.md
index c276a47..87dbbe9 100644
--- a/README.md
+++ b/README.md
@@ -69,4 +69,4 @@ structure.
 
 ## License
 
-MIT © [Rafael Xavier de Souza](http://rafael.xavier.blog.br)
+MIT © [OpenJS Foundation and other contributors](https://openjsf.org/)
diff --git a/index.js b/index.js
index 66aab5c..de910d8 100644
--- a/index.js
+++ b/index.js
@@ -5,7 +5,7 @@ function cssDependencies( data, which ) {
 		regexp = new RegExp( "\\/\\/>>\\s*css\\." + which + ":(.*)", "g" );
 
 	data.replace( regexp, function( garbage, input ) {
-		input = input.split( "," ).map( trim ); 
+		input = input.split( "," ).map( trim );
 		result.push.apply( result, input );
 	});
 
@@ -15,15 +15,11 @@ function cssDependencies( data, which ) {
 }
 
 function jsDependencies( data ) {
-	var match,
-		result = [];
-
-	match = data.match( /define\(\[([^\]]*?)\]/ );
-	if ( match !== null ) {
-		result = match[ 1 ].split( "," ).map( trim );
+	var match = data.match( /define\(\ ?\[([^\]]*?)\]/ );
+	if ( match === null ) {
+		return [];
 	}
-	
-	return result;
+	return match[ 1 ].replace( /\/\/.+/g, "" ).split( "," ).map( trim );
 }
 
 /**
diff --git a/package.json b/package.json
index 238c7ac..829939d 100644
--- a/package.json
+++ b/package.json
@@ -1,6 +1,6 @@
 {
   "name": "builder-jquery-css",
-  "version": "0.0.2",
+  "version": "0.0.4",
   "main": "index.js",
   "repository": {
     "type": "git",
diff --git a/test/fixtures/basic/foo.js b/test/fixtures/basic/foo.js
index 52736fc..7052c3c 100644
--- a/test/fixtures/basic/foo.js
+++ b/test/fixtures/basic/foo.js
@@ -1,2 +1,6 @@
 //>> css.baz: ./foo.css
-define([ "./bar" ]);
+define([
+
+	// comment
+	"./bar"
+]);
diff --git a/test/fixtures/nested/theme/input.css b/test/fixtures/nested/theme/input.css
new file mode 100644
index 0000000..c4236fe
--- /dev/null
+++ b/test/fixtures/nested/theme/input.css
@@ -0,0 +1 @@
+input {}
diff --git a/test/fixtures/nested/theme/version.css b/test/fixtures/nested/theme/version.css
new file mode 100644
index 0000000..208d16d
--- /dev/null
+++ b/test/fixtures/nested/theme/version.css
@@ -0,0 +1 @@
+body {}
diff --git a/test/fixtures/nested/version.js b/test/fixtures/nested/version.js
new file mode 100644
index 0000000..3af1221
--- /dev/null
+++ b/test/fixtures/nested/version.js
@@ -0,0 +1,2 @@
+//>> css.structure: ./theme/version.css
+define( "0.2.0" );
diff --git a/test/fixtures/nested/widgets/input.js b/test/fixtures/nested/widgets/input.js
new file mode 100644
index 0000000..d3ca601
--- /dev/null
+++ b/test/fixtures/nested/widgets/input.js
@@ -0,0 +1,3 @@
+//>> css.structure: ../theme/input.css
+define( ["../version"], function( version ) {
+} );
diff --git a/test/index.js b/test/index.js
index bf1e0d0..82bed37 100644
--- a/test/index.js
+++ b/test/index.js
@@ -49,6 +49,28 @@ describe( "jQuery CSS Builder", function() {
 
 	});
 
+	describe( "Basic - nested+appdir", function() {
+		var css,
+			files = {
+				"fixtures/version.js": fs.readFileSync( __dirname + "/fixtures/nested/version.js" ),
+				"fixtures/widgets/input.js": fs.readFileSync( __dirname + "/fixtures/nested/widgets/input.js" ),
+				"fixtures/theme/version.css": fs.readFileSync( __dirname + "/fixtures/nested/theme/version.css" ),
+				"fixtures/theme/input.css": fs.readFileSync( __dirname + "/fixtures/nested/theme/input.css" )
+			};
+
+		before(function( done ) {
+			jQueryCSSBuilder( files, "structure", { appDir: "fixtures", include: [ "widgets/input" ] }, function( error, _css ) {
+				css = _css;
+				done( error );
+			});
+		});
+
+		it( "should build just fine", function() {
+			expect( css ).to.equal( "input {}\nbody {}\n" );
+		});
+
+	});
+
 	describe( "Two bundles", function() {
 		var cssNorth, cssSouth;
 		var files = {