Hi!
Because of this update, I haven't been able to install this shim component of Jquery, even with the lowercase name "jquery".
I had to update my "bower.json" file with this
"jquery": "components/jquery#2.0.3"
instead of
jquery": "~2.0.0"
, then clean my Bower local cache, in order to install your jQuery version.
Have you planned to choose a more explicit Bower name for this "component" version of jQuery, like "component-jquery"? This would avoid this type of issue :-)