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DISCOVERING
COMPUTER
SCIENCE
Interdisciplinary Problems,
Principles, and Python
Programming
 CHAPMAN & HALL/CRC
TEXTBOOKS IN COMPUTING

Series Editors

John Impagliazzo Andrew McGettrick

Professor Emeritus, Hofstra University Department of Computer
and Information Sciences
University of Strathclyde

Aims and Scope

This series covers traditional areas of computing, as well as related technical areas, such as
software engineering, artificial intelligence, computer engineering, information systems, and
information technology. The series will accommodate textbooks for undergraduate and gradu-
ate students, generally adhering to worldwide curriculum standards from professional societ-
ies. The editors wish to encourage new and imaginative ideas and proposals, and are keen to
help and encourage new authors. The editors welcome proposals that: provide groundbreaking
and imaginative perspectives on aspects of computing; present topics in a new and exciting
context; open up opportunities for emerging areas, such as multi-media, security, and mobile
systems; capture new developments and applications in emerging fields of computing; and
address topics that provide support for computing, such as mathematics, statistics, life and
physical sciences, and business.

Published Titles

Paul Anderson, Web 2.0 and Beyond: Principles and Technologies

Henrik Bærbak Christensen, Flexible, Reliable Software: Using Patterns and Agile Development
John S. Conery, Explorations in Computing: An Introduction to Computer Science
John S. Conery, Explorations in Computing: An Introduction to Computer Science and Python
Programming
Jessen Havill, Discovering Computer Science: Interdisciplinary Problems, Principles, and
Python Programming
Ted Herman, A Functional Start to Computing with Python
Pascal Hitzler, Markus Krötzsch, and Sebastian Rudolph, Foundations of Semantic Web
Technologies
Mark J. Johnson, A Concise Introduction to Data Structures using Java
Mark J. Johnson, A Concise Introduction to Programming in Python
Lisa C. Kaczmarczyk, Computers and Society: Computing for Good
Mark C. Lewis, Introduction to the Art of Programming Using Scala
Bill Manaris and Andrew R. Brown, Making Music with Computers: Creative Programming in
Python
Uvais Qidwai and C.H. Chen, Digital Image Processing: An Algorithmic Approach with MATLAB®
David D. Riley and Kenny A. Hunt, Computational Thinking for the Modern Problem Solver
Henry M. Walker, The Tao of Computing, Second Edition
 Chapman & Hall/CRC
TEXTBOOKS IN COMPUTING

DISCOVERING
COMPUTER
SCIENCE
Interdisciplinary Problems,
Principles, and Python
Programming

Jessen Havill
Denison University
Granville, Ohio, USA
CRC Press
Taylor & Francis Group
6000 Broken Sound Parkway NW, Suite 300
Boca Raton, FL 33487-2742
© 2016 by Taylor & Francis Group, LLC
CRC Press is an imprint of Taylor & Francis Group, an Informa business

No claim to original U.S. Government works

Version Date: 20150318

International Standard Book Number-13: 978-1-4822-5416-7 (eBook - PDF)

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Contents

Preface xv

Acknowledgments xxiii

About the author xxv

Chapter 1  What is computation? 1

1.1 PROBLEMS AND ABSTRACTION 2
1.2 ALGORITHMS AND PROGRAMS 4
1.3 EFFICIENT ALGORITHMS 11
Organizing a phone tree 11
A smoothing algorithm 13
A better smoothing algorithm 17
1.4 COMPUTERS ARE DUMB 20
Inside a computer 20
Machine language 21
Everything is bits 22
The universal machine 26
1.5 SUMMARY 29
1.6 FURTHER DISCOVERY 30

Chapter 2  Elementary computations 31

2.1 WELCOME TO THE CIRCUS 31
2.2 ARITHMETIC 32
Finite precision 34
Division 34
Order of operations 35
Complex numbers 37
2.3 WHAT’S IN A NAME? 38
2.4 USING FUNCTIONS 45

v
vi  Contents

Built-in functions 45
Strings 47
Modules 51
*2.5 BINARY ARITHMETIC 54
Finite precision 55
Negative integers 56
Designing an adder 57
Implementing an adder 58
2.6 SUMMARY 62
2.7 FURTHER DISCOVERY 62

Chapter 3  Visualizing abstraction 65

3.1 DATA ABSTRACTION 66
3.2 VISUALIZATION WITH TURTLES 70
Drawing with iteration 72
3.3 FUNCTIONAL ABSTRACTION 76
Function parameters 78
Let’s plant a garden 84
3.4 PROGRAMMING IN STYLE 89
Program structure 89
Documentation 91
Descriptive names and magic numbers 95
3.5 A RETURN TO FUNCTIONS 97
Return vs. print 100
3.6 SCOPE AND NAMESPACES 103
Local namespaces 104
The global namespace 107
3.7 SUMMARY 111
3.8 FURTHER DISCOVERY 112

Chapter 4  Growth and decay 113

4.1 DISCRETE MODELS 114
Managing a fishing pond 114
Measuring network value 121
Organizing a concert 124
4.2 VISUALIZING POPULATION CHANGES 136
4.3 CONDITIONAL ITERATION 140
 Contents  vii

*4.4 CONTINUOUS MODELS 145

Difference equations 145
Radiocarbon dating 148
Tradeoffs between accuracy and time 150
Propagation of errors 152
Simulating an epidemic 153
*4.5 NUMERICAL ANALYSIS 159
The harmonic series 159
Approximating π 162
Approximating square roots 164
4.6 SUMMING UP 167
4.7 FURTHER DISCOVERY 171
4.8 PROJECTS 171
Project 4.1 Parasitic relationships 171
Project 4.2 Financial calculators 173
*Project 4.3 Market penetration 177
*Project 4.4 Wolves and moose 180

Chapter 5  Forks in the road 185

5.1 RANDOM WALKS 185
A random walk in Monte Carlo 192
Histograms 195
*5.2 PSEUDORANDOM NUMBER GENERATORS 200
Implementation 201
Testing randomness 203
*5.3 SIMULATING PROBABILITY DISTRIBUTIONS 205
The central limit theorem 206
5.4 BACK TO BOOLEANS 209
Short circuit evaluation 212
Complex expressions 214
*Using truth tables 216
Many happy returns 218
5.5 A GUESSING GAME 224
5.6 SUMMARY 233
5.7 FURTHER DISCOVERY 234
5.8 PROJECTS 234
viii  Contents

Project 5.1 The magic of polling 234

Project 5.2 Escape! 237

Chapter 6  Text, documents, and DNA 241

6.1 COUNTING WORDS 242
6.2 TEXT DOCUMENTS 250
Reading from text files 250
Writing to text files 253
Reading from the web 254
6.3 ENCODING STRINGS 259
Indexing and slicing 259
Creating modified strings 261
Encoding characters 263
6.4 LINEAR-TIME ALGORITHMS 270
Asymptotic time complexity 274
6.5 ANALYZING TEXT 279
Counting and searching 279
A concordance 284
6.6 COMPARING TEXTS 289
*6.7 GENOMICS 297
A genomics primer 297
Basic DNA analysis 301
Transforming sequences 302
Comparing sequences 304
Reading sequence files 306
6.8 SUMMARY 312
6.9 FURTHER DISCOVERY 313
6.10 PROJECTS 313
Project 6.1 Polarized politics 313
*Project 6.2 Finding genes 316

Chapter 7  Designing programs 321

7.1 HOW TO SOLVE IT 322
Understand the problem 323
Design an algorithm 324
Implement your algorithm as a program 327
Analyze your program for clarity, correctness, and efficiency 330
 Contents  ix

*7.2 DESIGN BY CONTRACT 331

Preconditions and postconditions 331
Checking parameters 332
Assertions 334
*7.3 TESTING 340
Unit testing 340
Regression testing 342
Designing unit tests 343
Testing floating point values 347
7.4 SUMMARY 350
7.5 FURTHER DISCOVERY 350

Chapter 8  Data analysis 351

8.1 SUMMARIZING DATA 351
8.2 CREATING AND MODIFYING LISTS 360
List accumulators, redux 360
Lists are mutable 361
Tuples 365
List operators and methods 366
*List comprehensions 368
8.3 FREQUENCIES, MODES, AND HISTOGRAMS 373
Tallying values 373
Dictionaries 374
8.4 READING TABULAR DATA 384
*8.5 DESIGNING EFFICIENT ALGORITHMS 390
A first algorithm 391
A more elegant algorithm 399
A more efficient algorithm 400
*8.6 LINEAR REGRESSION 403
*8.7 DATA CLUSTERING 409
Defining similarity 410
A k-means clustering example 411
Implementing k-means clustering 414
Locating bicycle safety programs 416
8.8 SUMMARY 421
8.9 FURTHER DISCOVERY 421
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